Protein ZmOrphan311 | |
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Information | |
Orphans Name: | ZmOrphan311 |
Species: | Maize |
Orphans Family: | Orphans |
Gene Name(Synonym): | |
Uniprot ID: | B6UI28 |
ZmOrphan311 is a protein in the Orphans family.
Overview of domains present in v5 transcripts | |
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PF02671 | |
Zm00001eb414150_T002 | |
Zm00001eb414150_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d024353 | DAPseq | sequence | fimo | position | |
Zm00001d024353 | DAPseq | sequence | fimo | position | |
Zm00001d024353 | ChIPseq | sequence | fimo | position | |
Zm00001d024353 | PChIPseq | sequence | fimo | position |
MGFTSKLKRSRHGVSMKLRVRDPRPTQTVQDGLSFVASLKRVFACEPDKYDEIIATMRQFKSGRSIDSLFVLSVNCSIRS
AVVVERVKVLLEGHPGLLRHFNQFLPWGYIRAHGPVGRISV
MGFTSKLKRSRHGVSMKLRVRDPRPTQTVQDGLSFVASLKRVFACEPDKYDEIIATMRQFKSGRSIDSLFVLSVNCSIRS
AVVVERVKVLLEGHPGLLRHFNQFLPWGYIRAHGPVGRISV
MGFTSKLKRSRHGVSMKLRVRDPRPTQTVQDGLSFVASLKRVFACEPDKYDEIIATMRQFKSGRSIDSLFVLSVNCSIRS
AVVVERVKVLLEGHPGLLRHFNQFLPWGYIRAHGPVGRISV
MGFTSKLKRSRHGVSMKLRVRDPRPTQTVQDGLSFVASLKRVFACEPDKYDEIIATMRQFKSGRSIDSLFVLSVNCSIRS
AVVVERVKVLLEGHPGLLRHFNQFLPWGYIRAHGPVGRISV
MGFTSKLKRSRHGVSMKLRVRDPRPTQTVQDGLSFVASLKRVFACEPDKYDEIIATMRQFKSGRSIDSLFVLSVNCSIRS
AVVVERVKVLLEGHPGLLRHFNQFLPWGYIRAHGPVGRISV
Secondary Structure Color Code | |
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BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF02671 |
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Hover here to show all domains |
CCTGAGGCCATCGTCGCTTTCCCTG...
CCTGAGGCCATCGTCGCTTTCCCTGCTCTCCTTCTTAAGATCTAGTATCCAGCGGCGTTGCAGGCGGCTAAACAACCGAACCGAGGAATGGGTTTCACAAGCAAGCTAAAGCGCTCGAGGCATGGTGTGTCCATGAAGCTCCGAGTCCGTGATCCGAGGCCAACGCAGACAGTCCAAGATGGACTCAGTTTCGTGGCGAGCTTGAAGCGCGTGTTCGCCTGCGAGCCTGACAAGTACGACGAGATCATCGCCACCATGCGCCAGTTCAAGTCCGGGAGGTCGATCGATTCTTTATTCGTCTTGTCTGTGAATTGCAGCATTCGTAGTGCGGTTGTGGTTGAGCGTGTGAAGGTGCTTCTGGAAGGTCACCCTGGTCTCCTCCGCCACTTCAACCAGTTCCTGCCATGGGGTTACATAAGGGCTCATGGACCAGTCGGGAGGATCAGCGTCTGATGCAGCCAGGGCAGGGAAGCGCGTGTGGCTACCTAAACAAGCCTAAACCTACTAGCTGGTGCTTTCCATCGCATGAATGGCAGAATGGGACAAGAGTATCTGGTTGGCCCGTCATGACTGCTATTCTGCATTGGCAGTACCATTAAGAACATGTAATGCTAAACATCAGACCGGCCGTATCTTTCTTGCATTATGTCATGTCTGTTCCAT
MGFTSKLKRSRHGVSMKLRVRDPRPTQTVQDGLSFVASLKRVFACEPDKYDEIIATMRQFKSGSIRSAVVVERVKVLLEG
HPGLLRHFNQFLPWGYIRAHGPVGRISV
AAACAACCGAACCGAGGAATGGGTT...
AAACAACCGAACCGAGGAATGGGTTTCACAAGCAAGCTAAAGCGCTCGAGGCATGGTGTGTCCATGAAGCTCCGAGTCCGTGATCCGAGGCCAACGCAGACAGTCCAAGATGGACTCAGTTTCGTGGCGAGCTTGAAGCGCGTGTTCGCCTGCGAGCCTGACAAGTACGACGAGATCATCGCCACCATGCGCCAGTTCAAGTCCGGGAGCATTCGTAGTGCGGTTGTGGTTGAGCGTGTGAAGGTGCTTCTGGAAGGTCACCCTGGTCTCCTCCGCCACTTCAACCAGTTCCTGCCATGGGGTTACATAAGGGCTCATGGACCAGTCGGGAGGATCAGCGTCTGATGCAGCCAGGGCAGGGAAGCGCGTGTGGCTACCTAAACAAGCCTAAACCTACTAGCTGGTGCTTTCCATCGCATGAATGGCAGAATGGGACAAGAGTATCTGGTTGGCCCGTCATGACTGCTATTCTGCATTGGCAGTACCATTAAGAACATGTAATGCTAAACATCAGACCGGCCGTATCTTTCTTGCATTATGTCATGTCTGTTCCATAATGGTGAAGCCACCTGACTGGCATCTTCTATATATCATGTATATATGCATGTTCTTGTC
MGFTSKLKRSRHGVSMKLRVRDPRPTQTVQDGLSFVASLKRVFACEPDKYDEIIATMRQFKSGSIRSAVVVERVKVLLEG
HPGLLRHFNQFLPWGYIRAHGPVGRISV
AAACAACCGAACCGAGGAATGGGTT...
AAACAACCGAACCGAGGAATGGGTTTCACAAGCAAGCTAAAGCGCTCGAGGCATGGTGTGTCCATGAAGCTCCGAGTCCGTGATCCGAGGCCAACGCAGACAGTCCAAGATGGACTCAGTTTCGTGGCGAGCTTGAAGCGCGTGTTCGCCTGCGAGCCTGACAAGTACGACGAGATCATCGCCACCATGCGCCAGTTCAAGTCCGGGAGCATTCGTAGTGCGGTTGTGGTTGAGCGTGTGAAGGTGCTTCTGGAAGGTCACCCTGGTCTCCTCCGCCACTTCAACCAGTTCCTGCCATGGGGTTACATAAGGGCTCATGGACCAGTCGGGAGGATCAGCGTCTGATGCAGCCAGGGCAGGGAAGCGCGTGTGGCTACCTAAACAAGCCTAAACCTACTAGCTGGTGCTTTCCATCGCATGAATGGCAGAATGGGACAAGAGTATCTGGTTGGCCCGTCATGACTGCTATTCTGCATTGGCAGTACCATTAAGAACATGTAATGCTAAACATCAGACCGGCCGTATCTTTCTTGCATTATGTCATGTCTGTTCCATAATGGTGAAGCCACCTGACTGGCATCTTCTATATATCATGTATATATGCATGTTCTTGTC
MGFTSKLKRSRHGVSMKLRVRDPRPTQTVQDGLSFVASLKRVFACEPDKYDEIIATMRQFKSGSIRSAVVVERVKVLLEG
HPGLLRHFNQFLPWGYIRAHGPVGRISV
CCTGAGGCCATCGTCGCTTTCCCTG...
CCTGAGGCCATCGTCGCTTTCCCTGCTCTCCTTCTTAAGATCTAGTATCCAGCGGCGTTGCAGGCGGCTAAACAACCGAACCGAGGAATGGGTTTCACAAGCAAGCTAAAGCGCTCGAGGCATGGTGTGTCCATGAAGCTCCGAGTCCGTGATCCGAGGCCAACGCAGACAGTCCAAGATGGACTCAGTTTCGTGGCGAGCTTGAAGCGCGTGTTCGCCTGCGAGCCTGACAAGTACGACGAGATCATCGCCACCATGCGCCAGTTCAAGTCCGGGAGCATTCGTAGTGCGGTTGTGGTTGAGCGTGTGAAGGTGCTTCTGGAAGGTCACCCTGGTCTCCTCCGCCACTTCAACCAGTTCCTGCCATGGGGTTACATAAGGGCTCATGGACCAGTCGGGAGGATCAGCGTCTGATGCAGCCAGGGCAGGGAAGCGCGTGTGGCTACCTAAACAAGCCTAAACCTACTAGCTGGTGCTTTCCATCGCATGAATGGCAGAATGGGACAAGAGTATCTGGTTGGCCCGTCATGACTGCTATTCTGCATTGGCAGTACCATTAAGAACATGTAATGCTAAACATCAGACCGGCCGTATCTTTCTTGCATTATGTCATGTCTGTTCCATAATGGTGAAGCCACCTGACTGGCATCTTCTATATATCATGTATATATGCATGTTCTTGTC
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